Index

A

apply_collection() (in module nispace.datasets)

apply_spins() (in module nispace.nulls)

B

beta() (in module nispace.stats.coloc)

brainplot() (in module nispace.plotting)

C

catplot() (in module nispace.plotting) clean_y() (nispace.api.NiSpace method) cohen() (in module nispace.stats.effectsize) cohen_nan() (in module nispace.stats.effectsize) cohen_paired() (in module nispace.stats.effectsize) cohen_paired_nan() (in module nispace.stats.effectsize)

colocalize() (nispace.api.NiSpace method) colors_from_values() (in module nispace.plotting) compute_meff() (in module nispace.stats.misc) copy() (nispace.api.NiSpace method) corr() (in module nispace.stats.coloc) correct_p() (nispace.api.NiSpace method) correlate_hemis_parc() (in module nispace.nulls)

D

dominance() (in module nispace.stats.coloc)

E

elasticnet() (in module nispace.stats.coloc)

F

fast_pls1() (in module nispace.stats.coloc) fetch_collection() (in module nispace.datasets) fetch_example() (in module nispace.datasets) fetch_metadata() (in module nispace.datasets) fetch_parcellation() (in module nispace.datasets) fetch_reference() (in module nispace.datasets) fetch_template() (in module nispace.datasets) fill_nan() (in module nispace.utils.utils)

find_parcel_hemispheres() (in module nispace.nulls) find_surf_parc_centroids() (in module nispace.nulls) find_vol_parc_centroids() (in module nispace.nulls) fit() (nispace.api.NiSpace method) (nispace.parcellate.Parcellater method) fit_transform() (nispace.parcellate.Parcellater method) from_pickle() (in module nispace.io) (nispace.api.NiSpace static method)

G

generate_null_maps() (in module nispace.nulls) generate_spins() (in module nispace.nulls) get_background_value() (in module nispace.utils.utils) get_colocalizations() (nispace.api.NiSpace method) get_column_names() (in module nispace.utils.utils) get_corrected_p_values() (nispace.api.NiSpace method)

get_distance_matrix() (in module nispace.nulls) get_normalized_colocalizations() (nispace.api.NiSpace method) get_p_values() (nispace.api.NiSpace method) get_x() (nispace.api.NiSpace method) get_y() (nispace.api.NiSpace method) get_z() (nispace.api.NiSpace method) group_comparison() (in module nispace.workflows)

H

heatmap() (in module nispace.plotting) hedges() (in module nispace.stats.effectsize)

hedges_nan() (in module nispace.stats.effectsize) hide_empty_axes() (in module nispace.plotting)

I

inverse_transform() (nispace.parcellate.Parcellater method)

L

lasso() (in module nispace.stats.coloc) linewidth_from_data_units() (in module nispace.plotting) load_distmat() (in module nispace.io) load_img() (in module nispace.io)

load_l2rmap() (in module nispace.io) load_labels() (in module nispace.io) load_spinmat() (in module nispace.io) logfc_nan() (in module nispace.stats.effectsize) lower() (in module nispace.utils.utils)

M

maxT_correction() (in module nispace.stats.misc) mc_correction() (in module nispace.stats.misc) mean_by_set_df() (in module nispace.utils.utils) meff_sidak_correction() (in module nispace.stats.misc) merge_parcellations() (in module nispace.utils.utils)

mirror_gifti() (in module nispace.utils.utils) mirror_nifti() (in module nispace.utils.utils) mlr() (in module nispace.stats.coloc) move_legend_fig_to_ax() (in module nispace.plotting) mutualinfo() (in module nispace.stats.coloc)

N

nan_detector() (in module nispace.utils.utils) nice_stats_labels() (in module nispace.plotting) NiSpace (class in nispace.api) normalize_colocalizations() (nispace.api.NiSpace method) np_any_axis1() (in module nispace.stats.misc)

null_to_p() (in module nispace.stats.misc) nullplot() (in module nispace.plotting) nulls_burt2018() (in module nispace.nulls) nulls_burt2020() (in module nispace.nulls) nulls_moran() (in module nispace.nulls) nulls_random() (in module nispace.nulls)

P

parc_vect_to_vol() (in module nispace.utils.utils) parcellate_data() (in module nispace.io) Parcellater (class in nispace.parcellate) partial_residuals_nan() (in module nispace.stats.misc) partialcorr() (in module nispace.stats.coloc) partialpearson() (in module nispace.stats.coloc) pcr() (in module nispace.stats.coloc) pearson() (in module nispace.stats.coloc)

permute() (nispace.api.NiSpace method) permute_groups() (in module nispace.stats.misc) plot() (nispace.api.NiSpace method) plot_brain() (nispace.api.NiSpace method) pls() (in module nispace.stats.coloc) prc() (in module nispace.stats.effectsize) print_arg_pairs() (in module nispace.utils.utils) print_significance() (in module nispace.plotting)

R

r2() (in module nispace.stats.coloc) rank1d() (in module nispace.stats.coloc) rank2d() (in module nispace.stats.coloc) rank_array() (in module nispace.stats.coloc) read_json() (in module nispace.io) reduce_x() (nispace.api.NiSpace method) relabel_gifti_parc() (in module nispace.utils.utils)

relabel_nifti_parc() (in module nispace.utils.utils) remove_nan() (in module nispace.utils.utils) residuals() (in module nispace.stats.misc) residuals_nan() (in module nispace.stats.misc) rho_to_z() (in module nispace.stats.misc) ridge() (in module nispace.stats.coloc) rzscore_nan() (in module nispace.stats.effectsize)

S

set_log() (in module nispace.utils.utils) simple_colocalization() (in module nispace.workflows)

simple_xsea() (in module nispace.workflows) step_maxT_correction() (in module nispace.stats.misc)

T

to_pickle() (in module nispace.io) (nispace.api.NiSpace method)

transform() (nispace.parcellate.Parcellater method) transform_y() (nispace.api.NiSpace method) transform_z() (nispace.api.NiSpace method)

V

vect_to_vol_arr() (in module nispace.utils.utils)

view_surf() (in module nispace.plotting) vol_to_vect_arr() (in module nispace.utils.utils)

W

write_json() (in module nispace.io)

Z

z_to_rho() (in module nispace.stats.misc) zscore() (in module nispace.stats.effectsize)

zscore_df() (in module nispace.stats.misc) zscore_nan() (in module nispace.stats.effectsize)